These microorganisms that oxidize methane anaerobically are an important component of the global carbon cycle and a major sink for methane on Earth.
Methane - a more than 20 times stronger greenhouse gas than carbon dioxide – constantly seeps out large methane hydrate reservoirs in the ocean floors, but 80 percent of it are immediately consumed by these microorganisms.
The importance of the anaerobic oxidation of methane for the Earths climate is known since 1999 and various international research groups work on isolating the responsible microorganisms, so far with little success. Pernthaler and co-workers developed a new molecular technique to selectively separate these microorganisms from their natural complex community, and subsequently sequenced their genome. The findings were exciting: Besides identifying all genes responsible for the anaerobic oxidation of methane, new bacterial partners of this syntrophic association were discovered and the ability to fix N2 could be demonstrated. The work has been published in the current issue of the renowned Journal Proceedings of the National Academy of Sciences (PNAS).
The beauty of small things revealed Microorganisms are the unseen majority on our planet: There are more than 100 Million times more microbial cells than stars in the visible universe, accounting for more than 90 percent of the Earths biomass. Yet, we have little idea what most of these bacteria and archaea are doing. It is not only their small size that makes them hard to study.
Most microorganisms can not be grown, and thus studied, in the lab. But recent developments of new molecular techniques allow the study of microorganisms where they live: In nature. This is leading to an explosion of knowledge with no end in sight. One of these techniques is genome sequencing - learning about the genetic make-up of an organism. This works well for single organisms, such as the sequencing of the human genome. The complexity of natural microbial communities, however, is a major problem.
The vast collection of genes can often not be linked to an organism or a physiological process. This plenitude of general information can be compared to a one-billion pieces puzzle of which you own only 300 pieces and you have to try to find out where which piece belongs and how the whole picture could look like.
Scientist at UFZ and Caltech now developed a method that solves this problem. Pernthaler and co-workers attached small ironbeads to the microorganisms of interest and pulled them out of the deep sea sediment by simply applying a magnet. These microbes are Archaea, which cooperate with sulfate reducing Bacteria to perform a thermodynamically tricky process: the anaerobic oxidation of methane (AOM).
These poorly understood consortia are globally distributed in oceanic sediments above methane hydrates and provide a significant sink for methane by substantially reducing the export of this potent greenhouse gas into the atmosphere.
After sequencing the genomes of the purified syntrophic consortia, Pernthaler and co-workers could find all genes responsible for AOM. The scientist also discovered an unexpected diversity in the bacterial partners of this syntrophic association, which may play a role in the performance of AOM. Pernthaler and co-workers also found genes for N2 fixation and demonstrated in lab experiments that the AOM archaea are indeed fixing N2. These results are intriguing, especially since the fixation of N2 is energetically expensive processes and the energy gained by AOM is low. The potential for metabolic versatility combined with the ability to form partnerships with other microorganisms, might be the secret to the successful distribution of this biogeochemically significant group of microorganisms. This work is being published in PNAS, May 13th, 2008, the method has been patented (Pernthaler A, Orphan VJ (2007) US Patent 11/746,374).http://www.alphagalileo.org/index.cfm?fuseaction=readrelease&releaseid=529276&ez_search=1
http://www.ufz.de/index.php?en=640More about micro-biology and other topics related to biodiversity can be found in a special edition of the UFZ newsletter to the 9th Conference of the Parties (COP 9) to the Convention on Biological Diversity from 19 to 30 May
2008 in Bonn, Germany.http://www.ufz.de/index.php?en=16709
At the Helmholtz Centre for Environmental Research (UFZ) scientists research the causes and consequences of far-reaching environmental changes. They study water resources, biological diversity, the consequences of climate change and adaptation possibilities, environmental and biotechnologies, bio energy, the behaviour of chemicals in the environment and their effect on health, as well as modelling and social science issues. Their guiding research principle is supporting the sustainable use of natural resources and helping to secure these basic requirements of life over the long term under the influence of global change. The UFZ employs 900 people at its sites in Leipzig, Halle and Magdeburg. It is funded by the German government and by the states of Saxony and Saxony-Anhalt.
The Helmholtz Association helps solve major, pressing challenges facing society, science and the economy with top scientific achievements in six research areas: Energy, Earth and Environment, Health, Key Technologies, Structure of Matter, Transport and Space. With 25,700 employees in 15 research centres and an annual budget of around EUR 2.3 billion, the Helmholtz Association is Germanys largest scientific organisation. Its work follows in the tradition of the great natural scientist Hermann von Helmholtz (1821-1894).
Tilo Arnhold | UFZ Leipzig-Halle
Water cooling for the Earth's crust
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Retreating permafrost coasts threaten the fragile Arctic environment
22.11.2017 | Helmholtz-Zentrum Potsdam - Deutsches GeoForschungsZentrum GFZ
The WHO reports an estimated 429,000 malaria deaths each year. The disease mostly affects tropical and subtropical regions and in particular the African continent. The Fraunhofer Institute for Silicate Research ISC teamed up with the Fraunhofer Institute for Molecular Biology and Applied Ecology IME and the Institute of Tropical Medicine at the University of Tübingen for a new test method to detect malaria parasites in blood. The idea of the research project “NanoFRET” is to develop a highly sensitive and reliable rapid diagnostic test so that patient treatment can begin as early as possible.
Malaria is caused by parasites transmitted by mosquito bite. The most dangerous form of malaria is malaria tropica. Left untreated, it is fatal in most cases....
The formation of stars in distant galaxies is still largely unexplored. For the first time, astron-omers at the University of Geneva have now been able to closely observe a star system six billion light-years away. In doing so, they are confirming earlier simulations made by the University of Zurich. One special effect is made possible by the multiple reflections of images that run through the cosmos like a snake.
Today, astronomers have a pretty accurate idea of how stars were formed in the recent cosmic past. But do these laws also apply to older galaxies? For around a...
Just because someone is smart and well-motivated doesn't mean he or she can learn the visual skills needed to excel at tasks like matching fingerprints, interpreting medical X-rays, keeping track of aircraft on radar displays or forensic face matching.
That is the implication of a new study which shows for the first time that there is a broad range of differences in people's visual ability and that these...
Computer Tomography (CT) is a standard procedure in hospitals, but so far, the technology has not been suitable for imaging extremely small objects. In PNAS, a team from the Technical University of Munich (TUM) describes a Nano-CT device that creates three-dimensional x-ray images at resolutions up to 100 nanometers. The first test application: Together with colleagues from the University of Kassel and Helmholtz-Zentrum Geesthacht the researchers analyzed the locomotory system of a velvet worm.
During a CT analysis, the object under investigation is x-rayed and a detector measures the respective amount of radiation absorbed from various angles....
The quantum world is fragile; error correction codes are needed to protect the information stored in a quantum object from the deteriorating effects of noise. Quantum physicists in Innsbruck have developed a protocol to pass quantum information between differently encoded building blocks of a future quantum computer, such as processors and memories. Scientists may use this protocol in the future to build a data bus for quantum computers. The researchers have published their work in the journal Nature Communications.
Future quantum computers will be able to solve problems where conventional computers fail today. We are still far away from any large-scale implementation,...
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