Forum for Science, Industry and Business

Sponsored by:     3M 
Search our Site:

 

UZH scientists predict activity of human genes

18.12.2015

Genetically identical sibling cells do not always behave the same way. So far this has been attributed to random molecular reactions. Now systems biologists of the University of Zurich have discovered an overlooked consequence of the spatial separation of cells into a nucleus and a cytoplasm. Building on top of this insight they could predict with supercomputers the activity of genes in individual human cells.

Genetically identical cells do not always behave the same way. According to the accepted theory, the reason are random molecular processes – known as random noise. For decades this view has been underpinned by numerous experiments and theoretical models.

Now the system biologists of the University of Zurich have made a momentous discovery: The spatial separation of human cells into a nucleus and cytoplasm creates some kind of passive filter. This filter suppresses the random noise and enables human cells to precisely regulate the activity of individual genes.

Observed more randomness in the nucleus

While the observations of Lucas Pelkmans and his team initially seemed at odds with current text-book knowledge, a second look revealed the missing explanation. During the activation of genes, the genetic information, which has been stored in DNA, becomes transcribed to messenger RNA.

“We could perfectly predict the messenger RNA in the cytoplasm and discovered much more randomness within the nucleus” explains Nico Battich, coauthor and PhD student at Institute of Molecular Biology. “One could envision the nucleus to act as a leaky bucket that on the one hand withholds messenger RNA, but on the other hand enables a delayed and even outflow. Thus the activity of genes in the cytoplasm becomes highly robust against random noise during the formation of messenger RNA in the nucleus.”

Smallest physiological details made visible

Thanks to their novel method, the Zurich scientists were the first ones who could study that many human genes. They managed to detect every single molecule that is produced by active genes. ”Previously one could only study few genes and in many cases these genes had to be genetically modified by researchers” says PhD student Thomas Stoeger.

“We realized that the activity of genes strongly differed between single cells, but could at the same time predict the activity for every single cell by visualizing subtle physiological details with microscopic dyes.”

The findings of the Zurich scientists impact several fields. “For example, evolutionary biology, where the spatial separation of cells marks a milestone in the emergence of intelligent life. But also biotechnology, where a precise control over artificial genes is desirable, and human medicine, if it should become possible to predict which malignant cells will respond to drugs.” concludes Prof. Lucas Pelkmans.

Literature:
Nico Battich, Thomas Stoeger, Lucas Pelkmans. Control of Transcript Variability in Single Mammalian Cells. Cell. December x, 2015. Doi: 10.1016/j.cell.2015.11.018

Contact:
Prof. Lucas Pelkmans
Institute of Molecular Life Sciences
University of Zurich
Phone +41 44 635 31 23
E-mail: lucas.pelkmans@imls.uzh.ch

Weitere Informationen:

http://www.mediadesk.uzh.ch/index_en.html

Melanie Nyfeler | Universität Zürich

More articles from Life Sciences:

nachricht Platinum nanoparticles for selective treatment of liver cancer cells
15.02.2019 | ETH Zurich

nachricht New molecular blueprint advances our understanding of photosynthesis
15.02.2019 | DOE/Lawrence Berkeley National Laboratory

All articles from Life Sciences >>>

The most recent press releases about innovation >>>

Die letzten 5 Focus-News des innovations-reports im Überblick:

Im Focus: Regensburg physicists watch electron transfer in a single molecule

For the first time, an international team of scientists based in Regensburg, Germany, has recorded the orbitals of single molecules in different charge states in a novel type of microscopy. The research findings are published under the title “Mapping orbital changes upon electron transfer with tunneling microscopy on insulators” in the prestigious journal “Nature”.

The building blocks of matter surrounding us are atoms and molecules. The properties of that matter, however, are often not set by these building blocks...

Im Focus: University of Konstanz gains new insights into the recent development of the human immune system

Scientists at the University of Konstanz identify fierce competition between the human immune system and bacterial pathogens

Cell biologists from the University of Konstanz shed light on a recent evolutionary process in the human immune system and publish their findings in the...

Im Focus: Transformation through Light

Laser physicists have taken snapshots of carbon molecules C₆₀ showing how they transform in intense infrared light

When carbon molecules C₆₀ are exposed to an intense infrared light, they change their ball-like structure to a more elongated version. This has now been...

Im Focus: Famous “sandpile model” shown to move like a traveling sand dune

Researchers at IST Austria find new property of important physical model. Results published in PNAS

The so-called Abelian sandpile model has been studied by scientists for more than 30 years to better understand a physical phenomenon called self-organized...

Im Focus: Cryo-force spectroscopy reveals the mechanical properties of DNA components

Physicists from the University of Basel have developed a new method to examine the elasticity and binding properties of DNA molecules on a surface at extremely low temperatures. With a combination of cryo-force spectroscopy and computer simulations, they were able to show that DNA molecules behave like a chain of small coil springs. The researchers reported their findings in Nature Communications.

DNA is not only a popular research topic because it contains the blueprint for life – it can also be used to produce tiny components for technical applications.

All Focus news of the innovation-report >>>

Anzeige

Anzeige

VideoLinks
Industry & Economy
Event News

Global Legal Hackathon at HAW Hamburg

11.02.2019 | Event News

The world of quantum chemistry meets in Heidelberg

30.01.2019 | Event News

Our digital society in 2040

16.01.2019 | Event News

 
Latest News

Gravitational waves will settle cosmic conundrum

15.02.2019 | Physics and Astronomy

Spintronics by 'straintronics'

15.02.2019 | Physics and Astronomy

Platinum nanoparticles for selective treatment of liver cancer cells

15.02.2019 | Life Sciences

VideoLinks
Science & Research
Overview of more VideoLinks >>>