The vessels spent most of their time circling around a floating robotic DNA lab, which drifted southward in the California Current.
This research, part of MBARI's CANON (Controlled, Agile, and Novel Observing Network) project, is all about "going with the flow"—tracking and studying how communities of microscopic marine organisms change as they are transported by ocean currents.
Conducting experiments in two very different settings
Led by MBARI biological oceanographer Francisco Chavez, during September, CANON researchers studied open-ocean water in the California Current, a meandering band of water that flows southeastward from Oregon to Northern Baja California. In October, a much larger cohort of researchers is studying the highly productive, but rapidly changing nearshore environment of Monterey Bay.
These two field experiments pose different challenges and opportunities for ocean researchers. Studying the offshore waters is challenging because humans and robotic vehicles must travel long distances and remain at sea for weeks at a time. Life in these offshore waters is often dominated by tiny organisms that are difficult to see even under a high-powered microscope, and often cannot be grown in the laboratory. These tiny organisms feed life in the ocean and have a strong influence on Earth's climate because they are so widespread.
Nearshore waters are more accessible to scientists and harbor dense populations of algae and other micro-organisms, as well as larger animals. However, this environment is affected by a web of complex interactions between the ocean, atmosphere, seafloor, land, runoff, and human activities. Because of these diverse influences, winds, currents, waves, and chemical and biological conditions often change rapidly, over periods of hours to days. This often makes it difficult for scientists to track and study ephemeral ocean features, such as algal blooms.
During both the nearshore and offshore experiments, CANON researchers simultaneously collected data on the physical and chemical properties of the ocean, along with detailed information on the algae, bacteria, and microscopic animals present. The researchers also measured the abundance of key organisms, determined how fast they were growing, and estimated how fast they were dying off or being consumed. Gathering all of this information simultaneously provides a more comprehensive picture of how the physical and chemical properties of the ocean affect the growth of entire communities of microscopic organisms.
Observing the microscopic life in moving water for more than a few hours is no easy feat. However, the CANON project builds on MBARI’s previous large-scale, multi-instrument, multi-institutional field programs, such as the Autonomous Ocean Sampling Network (AOSN). In contrast to these previous experiments, however, the CANON experiments focus on biological as well as physical processes.
The September experiment: Drifting with the California Current
The first CANON field experiment began on September 9, 2010, when MBARI’s flagship research vessel, the Western Flyer, headed westward from Moss Landing. The ship first headed west until it was 350 miles offshore, collecting water samples along the way. After analyzing these seawater samples and comparing them with satellite images of sea-surface temperature, the researchers attempted to locate the ever-changing boundaries of the California Current.
After completing this lengthy transect, the Western Flyer headed back toward the eastern (shoreward) boundary of the California Current, about 160 kilometers (100 miles) from the coast. There it met up with the research vessel Zephyr, host ship for MBARI's autonomous underwater vehicles (AUVs).
Once "on station" in the California Current, researchers on board the Western Flyer deployed a large, drifting buoy carrying a robotic DNA lab known as the Environmental Sample Processor (ESP). The Zephyr then deployed MBARI's upper-water-column AUV. At this point the field experiment began.
Drifting southward within the California Current, the ESP began automatically collecting water samples and analyzing the DNA of microscopic organisms within these samples. The Western Flyer followed the ESP as it drifted, allowing researchers to download data from the ESP and to collect water samples for later analysis on shore. Meanwhile, the AUV circled around the ESP, collecting detailed information about the physical and chemical properties of the water around it in real time.
The September CANON experiment involved a number of "firsts" for several research groups. For example, the ESP has been used in moored experiments for years, but this was the first time it collected data while drifting with the currents. In addition, the ESP was used not just to study genetic material, but to measure the amounts of important biological compounds generated by microscopic bacteria. This will help researchers understand how these bacteria are affecting the planktonic community and the rest of the food chain.
Similarly, programming MBARI's AUV to swim in circles (actually boxes) around a moving object (the drifting ESP) was a very complicated task. This provided a serious test for the AUV's control and scheduling system, known as T-REX.The drift experiment showed how complex a problem CANON is tackling. Waters were moving in different directions near the surface and just below, changing even further with depth. Had only a few days of information been collected it might have been impossible to discern what was going on. After the third day, however, the experiment started to pay off and scientists started to better understand on the complexities of the physical and chemical properties of the water. Observations showed that the photosynthetic community was dominated by very small organisms, termed picoplankton, and they were floating in relatively high levels of nitrate. The nitrate, however, was not getting utilized, and the picoplankton seemed to be using ammonia as its nitrogen source. This type of activity is common in waters that are iron-limited. Information collected previously suggested that this phenomena might occur in this part of the world during autumn but the extent of the region, covering hundreds of square kilometers surprised the CANON scientists.
Combining diverse skills for a challenging project
This project involved engineers, marine operations staff, and researchers from MBARI and other institutions. The MBARI research team for the September experiment included physical biological oceanographers Francisco Chavez and John Ryan; marine biologists Alexandra Worden and Chris Scholin; and engineer Kanna Rajan.
Research organizations participating in the project include the University of Washington (genomics) and the Massachusetts Institute of Technology (genomics). The Central and Northern California Ocean Observing System (CeNCOOS) will help get information from these experiments out to policy makers, marine resource managers, and the public.
For more information on this story, please contact:Judith Connor: (831) 775-1728, firstname.lastname@example.org
Nancy Barr | MBARI
Hunting pressure on forest animals in Africa is on the increase
09.02.2016 | Goethe-Universität Frankfurt am Main
Man-made underwater sound may have wider ecosystem effects than previously thought
05.02.2016 | University of Southampton
Today, plants and microorganisms are heavily used for the production of medicinal products. The production of biopharmaceuticals in plants, also referred to as “Molecular Pharming”, represents a continuously growing field of plant biotechnology. Preferred host organisms include yeast and crop plants, such as maize and potato – plants with high demands. With the help of a special algal strain, the research team of Prof. Ralph Bock at the Max Planck Institute of Molecular Plant Physiology in Potsdam strives to develop a more efficient and resource-saving system for the production of medicines and vaccines. They tested its practicality by synthesizing a component of a potential AIDS vaccine.
The use of plants and microorganisms to produce pharmaceuticals is nothing new. In 1982, bacteria were genetically modified to produce human insulin, a drug...
Atomic clock experts from the Physikalisch-Technische Bundesanstalt (PTB) are the first research group in the world to have built an optical single-ion clock which attains an accuracy which had only been predicted theoretically so far. Their optical ytterbium clock achieved a relative systematic measurement uncertainty of 3 E-18. The results have been published in the current issue of the scientific journal "Physical Review Letters".
Atomic clock experts from the Physikalisch-Technische Bundesanstalt (PTB) are the first research group in the world to have built an optical single-ion clock...
The University of Würzburg has two new space projects in the pipeline which are concerned with the observation of planets and autonomous fault correction aboard satellites. The German Federal Ministry of Economic Affairs and Energy funds the projects with around 1.6 million euros.
Detecting tornadoes that sweep across Mars. Discovering meteors that fall to Earth. Investigating strange lightning that flashes from Earth's atmosphere into...
Physicists from Saarland University and the ESPCI in Paris have shown how liquids on solid surfaces can be made to slide over the surface a bit like a bobsleigh on ice. The key is to apply a coating at the boundary between the liquid and the surface that induces the liquid to slip. This results in an increase in the average flow velocity of the liquid and its throughput. This was demonstrated by studying the behaviour of droplets on surfaces with different coatings as they evolved into the equilibrium state. The results could prove useful in optimizing industrial processes, such as the extrusion of plastics.
The study has been published in the respected academic journal PNAS (Proceedings of the National Academy of Sciences of the United States of America).
Exceeding critical temperature limits in the Southern Ocean may cause the collapse of ice sheets and a sharp rise in sea levels
A future warming of the Southern Ocean caused by rising greenhouse gas concentrations in the atmosphere may severely disrupt the stability of the West...
09.02.2016 | Event News
02.02.2016 | Event News
26.01.2016 | Event News
11.02.2016 | Life Sciences
11.02.2016 | Physics and Astronomy
11.02.2016 | Earth Sciences