Forum for Science, Industry and Business

Sponsored by:     3M 
Search our Site:

 

CiteXplore – integrating biomedical literature and data

28.11.2006
Today the European Molecular Biology Laboratory’s European Bioinformatics Institute (EMBL-EBI) launches CiteXplore, a new freely accessible literature resource service.

Biological researchers require two crucial sources of information: scientific literature published in peer-reviewed journals and databases storing key biological data such as DNA and protein sequences, functions and structures of molecules and microarray data. Tools that integrate these two sources of information are desperately sought.

EMBL-EBI scientists have developed CiteXplore, a tool that links electronic literature resources to bioinformatics databases, to fulfil this need. It integrates abstracts from various resources including the US National Library of Medicine’s MEDLINE database of abstracts from peer-reviewed biomedical journals, biological abstracts from patent applications from the European Patent Office, and Chinese Biological Abstracts from the Shanghai Information Center for Life Sciences, Chinese Academy of Sciences. From these abstracts CiteXplore links to full-text articles at various locations such as PubMedCentral and publisher websites.

CiteXplore also provides a direct link between the scientific literature and the EMBL-EBI’s biological databases. “When you are reading an abstract describing a specific gene or protein, typically you want more information on it, for example its sequence or its function, as well as easy access to the full paper,” says Peter Stoehr, who coordinates CiteXplore. CiteXplore uses powerful text-mining tools developed by EMBL-EBI researchers to link literature and databases automatically, so that at the touch of a button the biological terms are identified in the text and you can call up the record of the molecule that you are looking for.

... more about:
»Abstract »CiteXplore »literature

In future, the range of literature resources hosted in CiteXplore will be extended for better coverage of other domains such as plant science, agricultural and food sciences, and to integrate it with UK PubMedCentral, a recently launched project led by a consortium comprising the British Library, University of Manchester and EMBL-EBI.

Cath Brooksbank PhD | alfa
Further information:
http://www.ebi.ac.uk/citexplore

Further reports about: Abstract CiteXplore literature

More articles from Life Sciences:

nachricht The secret sulfate code that lets the bad Tau in
16.07.2018 | American Society for Biochemistry and Molecular Biology

nachricht Colorectal cancer risk factors decrypted
16.07.2018 | Max-Planck-Institut für Stoffwechselforschung

All articles from Life Sciences >>>

The most recent press releases about innovation >>>

Die letzten 5 Focus-News des innovations-reports im Überblick:

Im Focus: First evidence on the source of extragalactic particles

For the first time ever, scientists have determined the cosmic origin of highest-energy neutrinos. A research group led by IceCube scientist Elisa Resconi, spokesperson of the Collaborative Research Center SFB1258 at the Technical University of Munich (TUM), provides an important piece of evidence that the particles detected by the IceCube neutrino telescope at the South Pole originate from a galaxy four billion light-years away from Earth.

To rule out other origins with certainty, the team led by neutrino physicist Elisa Resconi from the Technical University of Munich and multi-wavelength...

Im Focus: Magnetic vortices: Two independent magnetic skyrmion phases discovered in a single material

For the first time a team of researchers have discovered two different phases of magnetic skyrmions in a single material. Physicists of the Technical Universities of Munich and Dresden and the University of Cologne can now better study and understand the properties of these magnetic structures, which are important for both basic research and applications.

Whirlpools are an everyday experience in a bath tub: When the water is drained a circular vortex is formed. Typically, such whirls are rather stable. Similar...

Im Focus: Breaking the bond: To take part or not?

Physicists working with Roland Wester at the University of Innsbruck have investigated if and how chemical reactions can be influenced by targeted vibrational excitation of the reactants. They were able to demonstrate that excitation with a laser beam does not affect the efficiency of a chemical exchange reaction and that the excited molecular group acts only as a spectator in the reaction.

A frequently used reaction in organic chemistry is nucleophilic substitution. It plays, for example, an important role in in the synthesis of new chemical...

Im Focus: New 2D Spectroscopy Methods

Optical spectroscopy allows investigating the energy structure and dynamic properties of complex quantum systems. Researchers from the University of Würzburg present two new approaches of coherent two-dimensional spectroscopy.

"Put an excitation into the system and observe how it evolves." According to physicist Professor Tobias Brixner, this is the credo of optical spectroscopy....

Im Focus: Chemical reactions in the light of ultrashort X-ray pulses from free-electron lasers

Ultra-short, high-intensity X-ray flashes open the door to the foundations of chemical reactions. Free-electron lasers generate these kinds of pulses, but there is a catch: the pulses vary in duration and energy. An international research team has now presented a solution: Using a ring of 16 detectors and a circularly polarized laser beam, they can determine both factors with attosecond accuracy.

Free-electron lasers (FELs) generate extremely short and intense X-ray flashes. Researchers can use these flashes to resolve structures with diameters on the...

All Focus news of the innovation-report >>>

Anzeige

Anzeige

VideoLinks
Industry & Economy
Event News

Leading experts in Diabetes, Metabolism and Biomedical Engineering discuss Precision Medicine

13.07.2018 | Event News

Conference on Laser Polishing – LaP: Fine Tuning for Surfaces

12.07.2018 | Event News

11th European Wood-based Panel Symposium 2018: Meeting point for the wood-based materials industry

03.07.2018 | Event News

 
Latest News

Nano-kirigami: 'Paper-cut' provides model for 3D intelligent nanofabrication

16.07.2018 | Physics and Astronomy

New players, standardization and digitalization for more rail freight transport

16.07.2018 | Transportation and Logistics

Researchers discover natural product that could lead to new class of commercial herbicide

16.07.2018 | Agricultural and Forestry Science

VideoLinks
Science & Research
Overview of more VideoLinks >>>