Some phytoplankton can produce toxins that are harmful to other marine organisms, including fish. Holly A. Bowers of the University of Kalmar in Sweden has studied the DNA of phytoplankton in order to identify and quantify different types of harmful phytoplankton species.
Her work is a key piece of the puzzle when it comes to understanding when and how harmful phytoplankton species, such as e.g. the "killer algae" become dominant and threaten to kill off fish.
Just like plants on land, phytoplankton is an important source of nutrition for other organisms and is responsible for the major part of the global primary production. Sometimes the phytoplankton toxins can be so potent that they can cause severe illness and even death in humans.
Authorities, administrators, and researchers are interested in methods that can rapidly locate harmful phytoplankton species. Since phytoplankton species are tiny, 1-100 thousandths of a mm, and several of them look similar, it is difficult to distinguish various species in a microscope. One way to get around this is to analyze their DNA.
"DNA is species-specific and is similar to a fingerprint, which makes it possible to distinguish between different species", says Holly A. Bowers.
One way to analyze DNA is through real-time PCR, where you dye the DNA of a single species with a fluorescent preparation. The light can then be measured, and more light means more cells of the species there are in the water sample.
Holly A. Bowers' doctoral thesis describes how real-time PCR has been adapted to quickly and reliably identify and estimate a number of harmful phytoplankton species quantities present in the water. The DNA tests that Holly A. Bowers developed for her thesis are now used in several places around the world, especially in the Chesapeake Bay, Maryland, U.S. The findings of the DNA tests have helped researchers, authorities, and administrators to understand the spread of harmful phytoplankton species. The part of the doctoral work carried out in the U.S. mainly focused on identifying harmful species as part of a state-sponsored monitoring program. In Kalmar, Sweden, the DNA tests were used to study the feeding behavior of a phytoplankton species responsible for fish kills in coastal waters around the world, including the Baltic outside Kalmar.
The external examiner was Professor Lisa Campbell, Texas A&M University, USA.For more information:
Karin Ekebjär | idw
Climate Impact Research in Hannover: Small Plants against Large Waves
17.08.2018 | Leibniz Universität Hannover
First transcription atlas of all wheat genes expands prospects for research and cultivation
17.08.2018 | Leibniz-Institut für Pflanzengenetik und Kulturpflanzenforschung
New design tool automatically creates nanostructure 3D-print templates for user-given colors
Scientists present work at prestigious SIGGRAPH conference
Most of the objects we see are colored by pigments, but using pigments has disadvantages: such colors can fade, industrial pigments are often toxic, and...
Scientists at the University of California, Los Angeles present new research on a curious cosmic phenomenon known as "whistlers" -- very low frequency packets...
Scientists develop first tool to use machine learning methods to compute flow around interactively designable 3D objects. Tool will be presented at this year’s prestigious SIGGRAPH conference.
When engineers or designers want to test the aerodynamic properties of the newly designed shape of a car, airplane, or other object, they would normally model...
Researchers from TU Graz and their industry partners have unveiled a world first: the prototype of a robot-controlled, high-speed combined charging system (CCS) for electric vehicles that enables series charging of cars in various parking positions.
Global demand for electric vehicles is forecast to rise sharply: by 2025, the number of new vehicle registrations is expected to reach 25 million per year....
Proteins must be folded correctly to fulfill their molecular functions in cells. Molecular assistants called chaperones help proteins exploit their inbuilt folding potential and reach the correct three-dimensional structure. Researchers at the Max Planck Institute of Biochemistry (MPIB) have demonstrated that actin, the most abundant protein in higher developed cells, does not have the inbuilt potential to fold and instead requires special assistance to fold into its active state. The chaperone TRiC uses a previously undescribed mechanism to perform actin folding. The study was recently published in the journal Cell.
Actin is the most abundant protein in highly developed cells and has diverse functions in processes like cell stabilization, cell division and muscle...
17.08.2018 | Event News
08.08.2018 | Event News
27.07.2018 | Event News
17.08.2018 | Physics and Astronomy
17.08.2018 | Information Technology
17.08.2018 | Life Sciences