Forum for Science, Industry and Business

Sponsored by:     3M 
Search our Site:

 

Chemists create unusual lariat RNA, a key intermediate in biological splicing

19.05.2003


The production of lariat RNAs is a key step in the biologically important process of splicing. Because splicing changes the protein that is made from a given gene, a fundamental understanding of splicing is critical for comprehending the connections between genes and proteins. The study of splicing, however, has been very difficult in part because lariat RNAs have been nearly impossible to make artificially.


Chemical reaction catalyzed by a DNA enzyme that creates lariat RNA.


Stylized diagram of a lariat RNA showing the branch site. The various colors represent the different nucleotides A, G, C and U.



Now, chemistry professor Scott K. Silverman and graduate student Yangming Wang at the University of Illinois at Urbana-Champaign have found artificial deoxyribozymes (DNA enzymes) that synthesize branched and lariat RNAs. The researchers report their discovery in a paper that has been accepted for publication in the Journal of the American Chemical Society, and posted on its Web site

"Lariat RNAs are crucial intermediates in the biological splicing of messenger RNAs," Silverman said. "The lariat RNAs synthesized by our new DNA enzymes should help provide a detailed biochemical understanding of RNA splicing."


Lariat RNAs have an unusual connectivity in which a key "branch site" nucleotide is the meeting point between three RNA strands, two of which connect to form a loop, Silverman said. "The resulting molecule, which resembles a lariat, has the same connectivity as introns (intervening regions that don’t perform coding functions) that are removed from messenger RNAs during biological splicing in fungi, eukaryotes, and even some bacteria."

Silverman and Wang used a process called in vitro selection to sample billions of DNA sequences for the desired chemical selectivity. The DNA enzymes the researchers found can catalyze branched RNA formation at rates up to 5 million times faster than the reaction would occur in the absence of the enzyme.

"The ability to make these branches and lariats offers us a new path for the biochemical investigation of RNA splicing," Silverman said. "Errors in making proteins have been linked to certain diseases and birth defects, for example. By incorporating chemical modifications into these key structural intermediates, we can more thoroughly examine the fundamental splicing process."


###
The March of Dimes, National Institutes of Health, Petroleum Research Fund and the University of Illinois funded the work

James E. Kloeppel | EurekAlert!
Further information:
http://www.uiuc.edu/

More articles from Life Sciences:

nachricht Cancer diagnosis: no more needles?
25.05.2018 | Christian-Albrechts-Universität zu Kiel

nachricht Less is more? Gene switch for healthy aging found
25.05.2018 | Leibniz-Institut für Alternsforschung - Fritz-Lipmann-Institut e.V. (FLI)

All articles from Life Sciences >>>

The most recent press releases about innovation >>>

Die letzten 5 Focus-News des innovations-reports im Überblick:

Im Focus: Powerful IT security for the car of the future – research alliance develops new approaches

The more electronics steer, accelerate and brake cars, the more important it is to protect them against cyber-attacks. That is why 15 partners from industry and academia will work together over the next three years on new approaches to IT security in self-driving cars. The joint project goes by the name Security For Connected, Autonomous Cars (SecForCARs) and has funding of €7.2 million from the German Federal Ministry of Education and Research. Infineon is leading the project.

Vehicles already offer diverse communication interfaces and more and more automated functions, such as distance and lane-keeping assist systems. At the same...

Im Focus: Molecular switch will facilitate the development of pioneering electro-optical devices

A research team led by physicists at the Technical University of Munich (TUM) has developed molecular nanoswitches that can be toggled between two structurally different states using an applied voltage. They can serve as the basis for a pioneering class of devices that could replace silicon-based components with organic molecules.

The development of new electronic technologies drives the incessant reduction of functional component sizes. In the context of an international collaborative...

Im Focus: LZH showcases laser material processing of tomorrow at the LASYS 2018

At the LASYS 2018, from June 5th to 7th, the Laser Zentrum Hannover e.V. (LZH) will be showcasing processes for the laser material processing of tomorrow in hall 4 at stand 4E75. With blown bomb shells the LZH will present first results of a research project on civil security.

At this year's LASYS, the LZH will exhibit light-based processes such as cutting, welding, ablation and structuring as well as additive manufacturing for...

Im Focus: Self-illuminating pixels for a new display generation

There are videos on the internet that can make one marvel at technology. For example, a smartphone is casually bent around the arm or a thin-film display is rolled in all directions and with almost every diameter. From the user's point of view, this looks fantastic. From a professional point of view, however, the question arises: Is that already possible?

At Display Week 2018, scientists from the Fraunhofer Institute for Applied Polymer Research IAP will be demonstrating today’s technological possibilities and...

Im Focus: Explanation for puzzling quantum oscillations has been found

So-called quantum many-body scars allow quantum systems to stay out of equilibrium much longer, explaining experiment | Study published in Nature Physics

Recently, researchers from Harvard and MIT succeeded in trapping a record 53 atoms and individually controlling their quantum state, realizing what is called a...

All Focus news of the innovation-report >>>

Anzeige

Anzeige

VideoLinks
Industry & Economy
Event News

In focus: Climate adapted plants

25.05.2018 | Event News

Save the date: Forum European Neuroscience – 07-11 July 2018 in Berlin, Germany

02.05.2018 | Event News

Invitation to the upcoming "Current Topics in Bioinformatics: Big Data in Genomics and Medicine"

13.04.2018 | Event News

 
Latest News

In focus: Climate adapted plants

25.05.2018 | Event News

Flow probes from the 3D printer

25.05.2018 | Machine Engineering

Less is more? Gene switch for healthy aging found

25.05.2018 | Life Sciences

VideoLinks
Science & Research
Overview of more VideoLinks >>>