The researchers, from Arizona State University and Washington University, St. Louis, report in the current online edition (Feb. 4) of the Proceedings of the National Academy of Sciences, that they have sequenced the genome of the cyanobacterium, Acaryochloris marina, which through its production of chlorophyll d can absorb “red edge,” near infrared long wavelength light -- light that is invisible to the naked eye. Acaryochloris marina has a massive genome (8.3 million base pairs) and is among the largest of 55 cyanobacterial strains in the world. It is the first chlorophyll-d containing organism to be sequenced.
The advance has applications in plant research, said Jeffrey Touchman, an assistant professor ASU’s School of Life Sciences and lead author of the paper, “Niche adaptation and genome expansion in the chlorophyll d-producing cyanobacterium Acaryochloris marina.”
“Chlorophyll d harvests light from a spectrum of light that few other organisms can, and that enables this organism to carve out its own special niche in the environment to pick up far-red light,” Touchman explained. “The agricultural implications could be significant. One could imagine the transfer of this biochemical mechanism to other plants where they could then use a wider range of the light spectrum and become sort of ‘plant powerhouses,’ deriving increased energy by employing this new photosynthetic pigment.”
There is a bioenergy link to this work, said Touchman, who is a member of ASU’s Center for Bioenergy and Photosynthesis. It could be used for crops that are turned into fuels or to generate biomass.
Touchman worked with Robert Blankenship of Washington University on the sequencing project, which involved collaborators from Australia and Japan. Touchman also has an appointment with Translational Genomics Research Institute (TGen), Scottsdale, Ariz., where he operates a high-throughput DNA sequencing facility. The work is supported by the National Science Foundation.
Blankenship said with every gene of Acaryochloris marina now sequenced and annotated, the immediate goal is to find the enzyme that causes a chemical structure change in chlorophyll d, making it different from the more common chlorophyll a, and b, but also from about nine other forms of chlorophyll.
“The synthesis of chlorophyll by an organism is complex, involving 17 different steps in all,” Blankenship said. “Someplace near the end of this process, an enzyme transforms a vinyl group to a formyl group to make chlorophyll d. This transformation of chemical forms is not known in any other chlorophyll molecules.”
Touchman and Blankenship said they have some candidate genes they will test. They plan to insert these genes into an organism that only makes chlorophyll a. If the organism learns to synthesize chlorophyll d with one of the genes, the mystery of chlorophyll d synthesis will be solved, and then the excitement will begin.
The researchers said harvesting solar power through plants or other organisms that would be genetically altered with the chlorophyll d gene could make them “solar power factories” that generate and store solar energy. Consider a seven-foot tall corn plant genetically tailored with the chlorophyll d gene to be expressed at the very base of the stalk. While the rest of the plant synthesized chlorophyll a, absorbing short wave light, the base is absorbing “red edge” light in the 710 nanometer range.
Energy could be stored in the base without competing with any other part of the plant for photosynthesis, as the rest only makes chlorophyll a. Also, the altered corn using the chlorophyll d gene could become a super plant because of its enhanced ability to harness energy from the Sun.
That model is similar to how Acaryochloris marina actually operates in the South Pacific, specifically Australia’s Great Barrier Reef. Discovered just 11 years ago, the cyanobacterium lives in a symbiotic relationship with a sponge-like marine animal popularly called a sea squirt. The Acaryochloris marina lives beneath the sea squirt, which is a marine animal that lives attached to rocks just below the surface of the water. The cyanobacterium absorbs “red edge” light through the tissues of the sea squirt.
The genome, said Blankenship, is “fat and happy. Acaryochloris marina lies down there using far red light that no one else can use. The organism has never been under very strong selection pressure to maintain a modest genome size. It’s in kind of a sweet spot. Living in this environment is what allowed it to have such dramatic genome expansion.”
Touchman said that once the gene that causes the late-step chemical transformation is found and inserted successfully into other plants or organisms, that it could potentially represent a five percent increase in available light for organisms to use.
“We now have the complete genetic information of a novel organism that makes this type of pigment that no other organism does,” he said. “We don’t yet know what every gene does, but this presents a fertile area for future studies. When we find the chlorophyll-d enzyme and then look into transferring it into other organisms, we’ll be working to extend the range of potentially useful radiation from our Sun.”
Skip Derra | EurekAlert!
Flow of cerebrospinal fluid regulates neural stem cell division
22.05.2018 | Helmholtz Zentrum München - Deutsches Forschungszentrum für Gesundheit und Umwelt
Chemists at FAU successfully demonstrate imine hydrogenation with inexpensive main group metal
22.05.2018 | Friedrich-Alexander-Universität Erlangen-Nürnberg
So-called quantum many-body scars allow quantum systems to stay out of equilibrium much longer, explaining experiment | Study published in Nature Physics
Recently, researchers from Harvard and MIT succeeded in trapping a record 53 atoms and individually controlling their quantum state, realizing what is called a...
The historic first detection of gravitational waves from colliding black holes far outside our galaxy opened a new window to understanding the universe. A...
A team led by Austrian experimental physicist Rainer Blatt has succeeded in characterizing the quantum entanglement of two spatially separated atoms by observing their light emission. This fundamental demonstration could lead to the development of highly sensitive optical gradiometers for the precise measurement of the gravitational field or the earth's magnetic field.
The age of quantum technology has long been heralded. Decades of research into the quantum world have led to the development of methods that make it possible...
Cardiovascular tissue engineering aims to treat heart disease with prostheses that grow and regenerate. Now, researchers from the University of Zurich, the Technical University Eindhoven and the Charité Berlin have successfully implanted regenerative heart valves, designed with the aid of computer simulations, into sheep for the first time.
Producing living tissue or organs based on human cells is one of the main research fields in regenerative medicine. Tissue engineering, which involves growing...
A team of scientists of the Max Planck Institute for the Structure and Dynamics of Matter (MPSD) at the Center for Free-Electron Laser Science in Hamburg investigated optically-induced superconductivity in the alkali-doped fulleride K3C60under high external pressures. This study allowed, on one hand, to uniquely assess the nature of the transient state as a superconducting phase. In addition, it unveiled the possibility to induce superconductivity in K3C60 at temperatures far above the -170 degrees Celsius hypothesized previously, and rather all the way to room temperature. The paper by Cantaluppi et al has been published in Nature Physics.
Unlike ordinary metals, superconductors have the unique capability of transporting electrical currents without any loss. Nowadays, their technological...
02.05.2018 | Event News
13.04.2018 | Event News
12.04.2018 | Event News
18.05.2018 | Power and Electrical Engineering
18.05.2018 | Information Technology
18.05.2018 | Information Technology