Forum for Science, Industry and Business

Sponsored by:     3M 
Search our Site:

 

ISU researchers help map first plant-parasitic nematode genome sequence

08.09.2008
There are numerous plant-parasitic nematodes in the world, but only a handful are responsible for the largest part of an estimated $157 billion in agricultural damage globally every year. Nematodes are small worms that burrow into plant roots and feed off living cells.

Now, Iowa State University researchers have contributed to the release of the annotated genome of one of the most destructive nematodes: Meloidogyne incognita -- the southern root-knot nematode, as reported recently in the journal Nature Biotechnology.

Sequencing the genome is a critical step toward comprehensively understanding how the organism works and may pave the way for research on ways to fight the pest.

"This is considered to be one of, if not the most important plant-parasitic nematode species across the world," said Thomas Baum, professor and chair of plant pathology and head of Iowa State University's contribution to the genome sequence project.

... more about:
»Genome »nematode »plant-parasitic »sequence

Root-knot nematodes are so important because they can be found almost anywhere in the world on almost any plant, he said. Nematodes are the most abundant animals on earth.

"Many of the nematodes that are really bad pathogens are very specialized on which plant they attack," said Baum. "This nematode has a huge host range. For us nematologists, it is very interesting and challenging to study."

Because the pest is so widespread, many nematologists around the world were eager to help with the project. The lead investigator was Pierre Abad of the Insitut National de Recherche Agronomiquea, a French research group, with help from researchers in Belgium, Holland, Great Britain, Switzerland, and Iowa State University and North Carolina State University in the US.

"Because it is such a worldwide problem, people are eager to contribute," Baum said. "Also, because it is the first plant-parasitic nematode to have its sequence released, people are very excited about it."

Chemical treatments for killing nematodes, called nematicides, are dangerous to humans and other animals so they've been restricted in use for decades. Technology for controlling nematodes has advanced little in the past three decades.

Besides being a devastating crop pathogen, Meloidogyne incognita has some remarkable biological adaptations that make it a fascinating organism to study.

Baum said that the sex of the tiny worms, or better the lack thereof is very intriguing. Only females reproduce and they do so without having sex, so it remains a puzzle why males of the species even exist. And since the females don't mate to reproduce, the offspring should be genetically identical to the mother -- like a clone - but they aren't. And as the offspring matures into males or females, some start as females and then change into males.

Baum's group included postdoctoral researcher Tarek Hewezi and assistant scientist Tom Maier from Iowa State. The three worked on a specific part of the genome and performed manual annotations of genes. Professor Davis and postdoctoral research associate, Noureddine Hamamouch, used the current known parasitism genes to identify the full suite or predicted parasitism genes in the root-knot nematode genome.

With this sequencing done, Baum thinks researchers can now try to understand this nematode. He also cautions that finding ways to control this pest will be a long process.

"For any effort in which you want to control the nematode, this is a great resource," Baum said. "But having the genome is only one of many steps in the right direction. Albeit, a very big one!"

Thomas Baum | EurekAlert!
Further information:
http://www.iastate.edu

Further reports about: Genome nematode plant-parasitic sequence

More articles from Life Sciences:

nachricht Water forms 'spine of hydration' around DNA, group finds
26.05.2017 | Cornell University

nachricht How herpesviruses win the footrace against the immune system
26.05.2017 | Helmholtz-Zentrum für Infektionsforschung

All articles from Life Sciences >>>

The most recent press releases about innovation >>>

Die letzten 5 Focus-News des innovations-reports im Überblick:

Im Focus: Can the immune system be boosted against Staphylococcus aureus by delivery of messenger RNA?

Staphylococcus aureus is a feared pathogen (MRSA, multi-resistant S. aureus) due to frequent resistances against many antibiotics, especially in hospital infections. Researchers at the Paul-Ehrlich-Institut have identified immunological processes that prevent a successful immune response directed against the pathogenic agent. The delivery of bacterial proteins with RNA adjuvant or messenger RNA (mRNA) into immune cells allows the re-direction of the immune response towards an active defense against S. aureus. This could be of significant importance for the development of an effective vaccine. PLOS Pathogens has published these research results online on 25 May 2017.

Staphylococcus aureus (S. aureus) is a bacterium that colonizes by far more than half of the skin and the mucosa of adults, usually without causing infections....

Im Focus: A quantum walk of photons

Physicists from the University of Würzburg are capable of generating identical looking single light particles at the push of a button. Two new studies now demonstrate the potential this method holds.

The quantum computer has fuelled the imagination of scientists for decades: It is based on fundamentally different phenomena than a conventional computer....

Im Focus: Turmoil in sluggish electrons’ existence

An international team of physicists has monitored the scattering behaviour of electrons in a non-conducting material in real-time. Their insights could be beneficial for radiotherapy.

We can refer to electrons in non-conducting materials as ‘sluggish’. Typically, they remain fixed in a location, deep inside an atomic composite. It is hence...

Im Focus: Wafer-thin Magnetic Materials Developed for Future Quantum Technologies

Two-dimensional magnetic structures are regarded as a promising material for new types of data storage, since the magnetic properties of individual molecular building blocks can be investigated and modified. For the first time, researchers have now produced a wafer-thin ferrimagnet, in which molecules with different magnetic centers arrange themselves on a gold surface to form a checkerboard pattern. Scientists at the Swiss Nanoscience Institute at the University of Basel and the Paul Scherrer Institute published their findings in the journal Nature Communications.

Ferrimagnets are composed of two centers which are magnetized at different strengths and point in opposing directions. Two-dimensional, quasi-flat ferrimagnets...

Im Focus: World's thinnest hologram paves path to new 3-D world

Nano-hologram paves way for integration of 3-D holography into everyday electronics

An Australian-Chinese research team has created the world's thinnest hologram, paving the way towards the integration of 3D holography into everyday...

All Focus news of the innovation-report >>>

Anzeige

Anzeige

Event News

Marine Conservation: IASS Contributes to UN Ocean Conference in New York on 5-9 June

24.05.2017 | Event News

AWK Aachen Machine Tool Colloquium 2017: Internet of Production for Agile Enterprises

23.05.2017 | Event News

Dortmund MST Conference presents Individualized Healthcare Solutions with micro and nanotechnology

22.05.2017 | Event News

 
Latest News

How herpesviruses win the footrace against the immune system

26.05.2017 | Life Sciences

Water forms 'spine of hydration' around DNA, group finds

26.05.2017 | Life Sciences

First Juno science results supported by University of Leicester's Jupiter 'forecast'

26.05.2017 | Physics and Astronomy

VideoLinks
B2B-VideoLinks
More VideoLinks >>>