Future medical conditions predicted with new statistical model

Like how Netflix recommends movies and TV shows or how Amazon.com suggests products to buy, the algorithm makes predictions based on what a patient has already experienced as well as the experiences of other patients showing a similar medical history.

“This provides physicians with insights on what might be coming next for a patient, based on experiences of other patients. It also gives a predication that is interpretable by patients,” said Tyler McCormick, an assistant professor of statistics and sociology at the University of Washington.

The algorithm will be published in an upcoming issue of the journal Annals of Applied Statistics. McCormick's co-authors are Cynthia Rudin, Massachusetts Institute of Technology, and David Madigan, Columbia University.

McCormick said that this is one of the first times that this type of predictive algorithm has been used in a medical setting. What differentiates his model from others, he said, is that it shares information across patients who have similar health problems. This allows for better predictions when details of a patient's medical history are sparse.

For example, new patients might lack a lengthy file listing ailments and drug prescriptions compiled from previous doctor visits. The algorithm can compare the patient's current health complaints with other patients who have a more extensive medical record that includes similar symptoms and the timing of when they arise. Then the algorithm can point to what medical conditions might come next for the new patient.

“We're looking at each sequence of symptoms to try to predict the rest of the sequence for a different patient,” McCormick said. If a patient has already had dyspepsia and epigastric pain, for instance, heartburn might be next.

The algorithm can also accommodate situations where it's statistically difficult to predict a less common condition. For instance, most patients do not experience strokes, and accordingly most models could not predict one because they only factor in an individual patient's medical history with a stroke. But McCormick's model mines medical histories of patients who went on to have a stroke and uses that analysis to make a stroke prediction.

The statisticians used medical records obtained from a multiyear clinical drug trial involving tens of thousands of patients aged 40 and older. The records included other demographic details, such as gender and ethnicity, as well as patients' histories of medical complaints and prescription medications.

They found that of the 1,800 medical conditions in the dataset, most of them – 1,400 – occurred fewer than 10 times. McCormick and his co-authors had to come up with a statistical way to not overlook those 1,400 conditions, while alerting patients who might actually experience those rarer conditions.

They came up with a statistical modeling technique that is grounded in Bayesian methods, the backbone of many predictive algorithms. McCormick and his co-authors call their approach the Hierarchical Association Rule Model and are working toward making it available to patients and doctors.

“We hope that this model will provide a more patient-centered approach to medical care and to improve patient experiences,” McCormick said.

The work was funded by a Google Ph.D. fellowship awarded to McCormick and by the National Science Foundation.

For more information, contact McCormick at 206-221-6981 or tylermc@uw.edu. Download the Annals of Applied Statistics paper from McCormick's website: http://www.stat.washington.edu/~tylermc/

Media Contact

Molly McElroy EurekAlert!

More Information:

http://www.uw.edu

All latest news from the category: Studies and Analyses

innovations-report maintains a wealth of in-depth studies and analyses from a variety of subject areas including business and finance, medicine and pharmacology, ecology and the environment, energy, communications and media, transportation, work, family and leisure.

Back to home

Comments (0)

Write a comment

Newest articles

Lighting up the future

New multidisciplinary research from the University of St Andrews could lead to more efficient televisions, computer screens and lighting. Researchers at the Organic Semiconductor Centre in the School of Physics and…

Researchers crack sugarcane’s complex genetic code

Sweet success: Scientists created a highly accurate reference genome for one of the most important modern crops and found a rare example of how genes confer disease resistance in plants….

Evolution of the most powerful ocean current on Earth

The Antarctic Circumpolar Current plays an important part in global overturning circulation, the exchange of heat and CO2 between the ocean and atmosphere, and the stability of Antarctica’s ice sheets….

Partners & Sponsors